All functions
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agglomerated()
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Create an agglomerated dataframe. |
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agglomerated_to_phyloseq()
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Convert an agglomerated dataframe to a phyloseq object. |
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features
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Example feature counts. |
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get_features()
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Extract feature count matrix from agglomerated dataframe |
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get_samples()
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Extract sample metadata from an agglomerated dataframe |
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get_taxa()
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Extract taxonomic annotations from agglomerated dataframe |
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phyloseq_to_agglomerated()
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Convert a phyloseq object to an agglomerated dataframe. |
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samples
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Example sample metadata. |
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taxa
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Example taxonomy annotations |